Simplifyfastaheaders.pl
WebbPort details: augustus Genome annotation tool 3.5.0 biology =0 Version of this port present on the latest quarterly branch. Maintainer: [email protected] Port Added: 2024-11-25 23:57:41 Last Update: 2024-11-25 23:55:09 Commit Hash: 8b43ef5 Also Listed In: science License: GPLv3 Description: AUGUSTUS is a program that predicts genes in eukaryotic … Webb1 jan. 2024 · If the headers are long or complex, rename them. You can use e.g. the script http://bioinf.uni-greifswald.de/bioinf/downloads/simplifyFastaHeaders.pl to produce a …
Simplifyfastaheaders.pl
Did you know?
Webb#!/usr/bin/perl # ########################################################################################################################### … WebbEnter the email address you signed up with and we'll email you a reset link.
WebbI have downloaded 1000 protein sequences having very big name in FASTA format. I want to cut short these name in a quick manner. Is it possible through and command line or … Webbmy $usage = "simplifyFastaHeaders.pl in.fa nameStem out.fa header.map\n\nin.fa is the input fasta sequence\nnameStem is the new beginning of each fasta entry\nout.fa is the …
Webb3 dec. 2012 · my $usage = " simplifyFastaHeaders.pl in.fa nameStem out.fa header.map \n\n in.fa is the input fasta sequence \n nameStem is the new beginning of each fasta … Webb#!/bin/bash ## This is a bash script to process amplicon sequences sequenced with MiSeq ### clear echo "-----" echo "+++++" echo " " echo " UPARSE workflow v2.0 Apr ...
Webb#!/usr/bin/perl # Katharina J. Hoff, Dec 3rd 2012 # # Simply fasta headers for usage with web service or autoAug.pl my $usage = "simplifyFastaHeaders.pl in.fa ...
WebbPort details on branch 2024Q1: augustus Genome annotation tool 3.5.0_1 biology =0 Version of this port present on the latest quarterly branch. Maintainer: [email protected] Port Added: 2024-11-25 23:57:41 Last Update: 2024-01-19 16:45:37 Commit Hash: 112013a Also Listed In: science License: GPLv3 Description: AUGUSTUS is a program … north brookfield zip codeWebbName Status Delta Visual Diff; tests/__pycache__/__init__.cpython-38.pyc: removed: tests/examples/__pycache__/__init__.cpython-38.pyc: removed: tests/examples ... north brookfield transfer stationWebbIf you have a fasta file with unsuitable headers and you do not know how to modify them automatically, you may use the Perl script simplifyFastaHeaders.pl. After saving it on … north brookfield tax collectorWebbAUGUSTUS is a software for gene prediction in eukaryotic genomic sequences that is based on a generalized hidden Markov model (HMM), a probabilistic model of a … north brookfield weather radarWebbPort details: augustus Genome annotation tool 3.5.0 biology =0 Version of this port present on the latest quarterly branch. Maintainer: [email protected] Port Added: 2024-11-25 … how to report compensation to officersWebb14 sep. 2024 · Package Version Patches format; augustus: 3.4.0+dfsg2-3: Patch series view the series file Patch File delta Description; search_config_path : src/properties.cc 3 2 + 1 - 0 ! 1 file changed, 2 insertions(+), 1 deletion(-) how to report comcast scam emailWebbPort details on branch 2024Q1: augustus Genome annotation tool 3.5.0_1 biology =0 Version of this port present on the latest quarterly branch. Maintainer: [email protected] … northbrook fire department nc